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</o:shapelayout></xml><![endif]--></head><body bgcolor=white lang=FR link=blue vlink=purple><div class=WordSection1><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Remove the loop on the subsets, and try again:<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do J=1,mtxsizJ</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do I=1,mtxsizI</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do K=1,AllAngles</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>I1=I</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> J1=J</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> K1=(K-1)</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Write(1) ITime,Mat(i1,j1,k1),</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> * (K1-1),MtxsizI*(J1-1)+(I1-1)</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><div><div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal><b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif";color:windowtext'>De :</span></b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif";color:windowtext'> Castor-devel [mailto:castor-devel-bounces@lists.castor-project.org] <b>De la part de</b> Carlier Thomas<br><b>Envoyé :</b> mercredi 26 avril 2017 11:02<br><b>À :</b> castor-devel@lists.castor-project.org<br><b>Objet :</b> [Castor-devel] Fwd: Re: [Castor-users] TR: SPECT reading Interfile<o:p></o:p></span></p></div></div><p class=MsoNormal><o:p> </o:p></p><p>Je regarde quand j'aurai le temps... Si certains veulent se lancer avant => pas de soucis !<o:p></o:p></p><p><o:p> </o:p></p><p>Thomas<o:p></o:p></p><div><p class=MsoNormal><br><br>-------- Message transféré -------- <o:p></o:p></p><table class=MsoNormalTable border=0 cellspacing=0 cellpadding=0><tr><td nowrap valign=top style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal align=right style='text-align:right'><b>Sujet : <o:p></o:p></b></p></td><td style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal>Re: [Castor-users] TR: SPECT reading Interfile<o:p></o:p></p></td></tr><tr><td nowrap valign=top style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal align=right style='text-align:right'><b>Date : <o:p></o:p></b></p></td><td style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal>Wed, 26 Apr 2017 08:59:17 +0000<o:p></o:p></p></td></tr><tr><td nowrap valign=top style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal align=right style='text-align:right'><b>De : <o:p></o:p></b></p></td><td style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal>Michael Ljungberg <a href="mailto:michael.ljungberg@med.lu.se"><michael.ljungberg@med.lu.se></a><o:p></o:p></p></td></tr><tr><td nowrap valign=top style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal align=right style='text-align:right'><b>Pour : <o:p></o:p></b></p></td><td style='padding:0cm 0cm 0cm 0cm'><p class=MsoNormal>Carlier Thomas <a href="mailto:thomas.carlier@chu-nantes.fr"><thomas.carlier@chu-nantes.fr></a><o:p></o:p></p></td></tr></table><p class=MsoNormal><br><br><br><o:p></o:p></p><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Note that I have written a conversion program from SPECT interfiles too castor format. According to our discussions I create the *.cdf file from the fortran loop</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do M=1,Subsets </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do J=1,mtxsizJ</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do I=1,mtxsizI</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> Do K=1,IAngles</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>I1=I</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> J1=J</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> K1=(K-1)*Subsets+M</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span lang=SV style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Write(1) ITime,Mat(i1,j1,k1),</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> * (K1-1),MtxsizI*(J1-1)+(I1-1)</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> EndDo</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>I hope this is write. Here is a zip file with the projections and the reconstructed images (three iterations and data organised in 16 subsets)</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'><a href="https://www.dropbox.com/s/bjvtvs7sy17skmv/castor.zip?dl=0">https://www.dropbox.com/s/bjvtvs7sy17skmv/castor.zip?dl=0</a></span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Hälsningar / Best regards<br><br>Michael</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><b><span style='font-family:"Calibri","sans-serif"'>From: </span></b><span style='font-family:"Calibri","sans-serif"'>Castor-users <a href="mailto:castor-users-bounces@lists.castor-project.org"><castor-users-bounces@lists.castor-project.org></a> on behalf of Carlier Thomas <a href="mailto:thomas.carlier@chu-nantes.fr"><thomas.carlier@chu-nantes.fr></a><br><b>Date: </b>Wednesday, 26 April 2017 at 10:26<br><b>To: </b><a href="mailto:castor-users@lists.castor-project.org">"castor-users@lists.castor-project.org"</a> <a href="mailto:castor-users@lists.castor-project.org"><castor-users@lists.castor-project.org></a><br><b>Subject: </b>Re: [Castor-users] TR: SPECT reading Interfile</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'> <o:p></o:p></p></div><p>Dear Michael,<o:p></o:p></p><p> <o:p></o:p></p><p>Would it be possible to send us your projections and your log file for this reconstruction?<o:p></o:p></p><p>We will investigate the problem with your data because we did not experience such artifacts.<o:p></o:p></p><p>Thanks<o:p></o:p></p><p> <o:p></o:p></p><p>Thomas<o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'> <o:p></o:p></p><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'>Le 26/04/2017 à 07:57, Michael Ljungberg a écrit :<o:p></o:p></p></div><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Hi Claude and others</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>I finally got it working for osem. Thank you for all help. I have noticed that when using a relatively low angles/subset there appear artefacts in the images that is constant in position though out the number of slices. The example is for 8 angles/subsets. I will investigate effect this a little bit more. Is there any one that has seen this before?</span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'>Hälsningar / Best regards<br><br>Michael</span><o:p></o:p></p><div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Verdana","sans-serif"'> </span><o:p></o:p></p></div></div></div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><br><br><br><br><o:p></o:p></p><pre>_______________________________________________<o:p></o:p></pre><pre>Castor-users mailing list<o:p></o:p></pre><pre><a href="mailto:Castor-users@lists.castor-project.org">Castor-users@lists.castor-project.org</a><o:p></o:p></pre><pre><a href="http://lists.castor-project.org/listinfo/castor-users">http://lists.castor-project.org/listinfo/castor-users</a><o:p></o:p></pre></blockquote><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><br><br><br><o:p></o:p></p></div></div></div></body></html>