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<div class="moz-cite-prefix">Hi,<br>
<br>
You will have to modify the tool for GATE conversion to CASToR, in
order to write the TOF information for each event.<br>
Page 33, you will find the specifications of a CASToR list-mode
event, you will have to write the TOF information at the right
position.<br>
<br>
If you added a time blurring module in GATE, then you can directly
write the difference in time arrival of the two singles.<br>
If you did not, you will have to add that stochastic time blurring
for each of the two singles of each coincidence in the conversion
tool.<br>
<br>
Also as you simulate the cherenkov photons to make GATE singles,
beware of what is the time actually written in the ROOT file (I do
not know what GATE does); is it the first photon, the integration
time of all photons, etc.<br>
<br>
Best<br>
Simon<br>
<br>
Le 24/07/2018 à 17:46, Dania Consuegra a écrit :<br>
</div>
<blockquote type="cite"
cite="mid:CAEjVn2CavABz6OmQhe8BoKLxHN++wTBCE9KUd40SE+b3TjUs5A@mail.gmail.com">
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<div dir="ltr"> <span></span>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify">
<font color="#000000"><font face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><span
style="background:transparent"><em><font face="Times
New Roman, serif"><span style="font-style:normal">Dear
</span></font></em><em><font face="Times New
Roman, serif"><span style="font-style:normal">CASToR</span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">
users,</span></font></em></span></font></font></font></p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify">
<font color="#000000"><font face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">I'm
</span></span></font></em><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">getting
nice</span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">CASToR
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">reconstructions
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">for
Cherenkov Photon PET </span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">using
as starting point my Gate simulation </span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">output
t</span></font></em><em><font face="Times New
Roman, serif"><span style="font-style:normal">hat
use a </span></font></em><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">CylindricalPET
</span></span></font></em><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">system…</span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal"><span
style="background:transparent">.</span></span></font></em></font></font></font></p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify">
<font color="#000000"><font face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">I'm</span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal"><span
style="background:transparent">
interested in evaluate the influence of TOF in
the reconstructed
images. </span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal"><span
style="background:transparent">So,
f</span></span></font></em><em><font face="Times
New Roman, serif"><span style="font-style:normal"><span
style="background:transparent">or
a same inicial Gate simulation output, </span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">I
would like to be able to compare between
reconstructed images using
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">CASToR
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">with
and without TOF…. </span></font></em></font></font></font>
</p>
<p style="margin-bottom:0in;line-height:0.13in" align="justify">
<em><span style="font-variant:normal"><font color="#000000"><font
face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><span
style="letter-spacing:normal"><span
style="font-style:normal"><span
style="font-weight:normal">How
can I do that </span></span></span></font></font></font></span></em><em><span
style="font-variant:normal"><font color="#000000"><font
face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><span
style="letter-spacing:normal"><span
style="font-style:normal"><span
style="font-weight:normal">?</span></span></span></font></font></font></span></em></p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify">
<font color="#000000"><font face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><em><font face="Times
New Roman, serif"><span style="font-style:normal">So
far what I could do for a same </span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal"><span
style="background:transparent">Gate
output </span></span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">is
compare the reconstruction using </span></font></em><em><font
face="Times New Roman, serif"><span
style="font-style:normal">CASToR
</span></font></em><em><font face="Times New Roman,
serif"><span style="font-style:normal">(without
TOF) and the reconstruction using MLP (with TOF)….</span></font></em></font></font></font></p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify"><span
style="font-size:12pt;font-family:"Times New
Roman",serif;color:rgb(0,0,0);font-variant-numeric:normal;font-variant-east-asian:normal">A</span><span
style="font-size:12pt;font-family:"Times New
Roman",serif;color:rgb(0,0,0);font-variant-numeric:normal;font-variant-east-asian:normal">ny
help I would </span><span
style="font-size:12pt;font-family:"Times New
Roman",serif;color:rgb(0,0,0);font-variant-numeric:normal;font-variant-east-asian:normal">really
</span><span style="font-size:12pt;font-family:"Times New
Roman",serif;color:rgb(0,0,0);font-variant-numeric:normal;font-variant-east-asian:normal">appreciate
it….</span><br>
</p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:100%"
align="justify"><span
style="font-size:12pt;font-family:"Times New
Roman",serif;color:rgb(0,0,0)">Kind
regards,</span><br>
</p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:100%"
align="justify"><span
style="background-color:transparent;font-size:12pt;font-family:"Times
New Roman",serif;color:rgb(0,0,0)">Dania
Consuegra Rodríguez</span><br>
</p>
<p
style="margin-bottom:0in;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;line-height:0.13in"
align="justify">
<font color="#000000"><font face="Times New Roman, serif"><font
style="font-size:12pt" size="3"><em><font face="Times
New Roman, serif"><span style="font-style:normal">Phd
student </span></font></em><em><font face="Times
New Roman, serif"><span style="font-style:normal"><b>Jožef
Stefan Institute</b></span></font></em></font></font></font></p>
<br>
</div>
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