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Dear Suguru,<br><br>
If you still encounter the issue:<br>
It looks like the software couldn't find the directory containing the CASToR configuration file, in particular the geometry file. Using the Makefile, the environnement variable CASTOR_CONFIG must be sent to the config directory before running the benchmark. The location looks like to be home/gate/castor_v3.0.1/config/ in your case.<br><br>
Hope this helps,<br>
Thibaut<br><br><br>
Suguru Katsube <<a href="mailto:sug.katsu@gmail.com">sug.katsu@gmail.com</a>> a écrit :</p>
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Hi all,
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I'm beginner of CASToR. I installed CASToR in virtual machine (ubuntu 18.04.2) and compiled CASToR using the provided Makefile.</div>
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After that, I tried to reconstruct example (castor_benchmark_v3_pet_list-mode)</div>
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I got the following error</div>
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[354] 09:23 vgate:~/Desktop/castor_benchmark_v3_pet_list-mode > ./run_benchmark_pet_list-mode_unix.sh<br>
==============================================================================================<br>
Reconstruction is going on. Should take from one to several minutes depending on the hardware.<br>
==============================================================================================<br>
sOutputManager::InitOutputDirectory() -> Output path is 'benchmark_pet_list-mode_challenger'<br>
castor-recon() -> Launch reconstruction from CASToR version 3.0.1.<br>
***** sScannerManager::GetAvailableScanners() -> Could not open the repository directory at: <span style="background-color:rgb(255,255,0)">/usr/share/cern/root-install/bin:/usr/share/geant4/geant4-install/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/share/gate/Gate-install/bin:/home/gate/castor_v3.0.1/bin:/home/gate/castor_v3.0.1/config/scanner/</span><br>
***** sScannerManager::FindScannerSystem() -> A problem occurred while recovering scanner names from the scanner repository !<br>
***** castor-recon() -> A problem occurred while searching for scanner system !<br>
***** Exit function called. Abort with code 1.<br>
==============================================================================================<br>
Check benchmark results (compare sensitivity image with the reference one)<br>
==============================================================================================<br>
***** Input header file 'benchmark_pet_list-mode_challenger_sensitivity.hdr' is missing or corrupted !<br><br>
==============================================================================================<br>
Check benchmark results (compare reconstructed image with the reference one)<br>
==============================================================================================<br>
***** Input header file 'benchmark_pet_list-mode_challenger_it2.hdr' is missing or corrupted !</div>
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How can I clear the error ? Any advice are appreciated.</div>
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Best regards, </div>
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Suguru Katsube</div>
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Kyushu university</div>
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<font face="arial, sans-serif">勝部 俊（Suguru Katsube）</font></div>
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<font face="arial, sans-serif"><font size="2"><font color="#000000"> E-mail: </font></font><a href="mailto:E-mail%3Aymmk88kmmy@gmail.com" style="color:rgb(17,85,204)" target="_blank">sug.katsu@gmail.com</a></font></p>
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