[Castor-users] Error in running example benchmark

Suguru Katsube sug.katsu at gmail.com
Sat Mar 14 09:49:39 CET 2020


Hi all,

I'm beginner of CASToR. I installed CASToR in virtual machine (ubuntu
18.04.2) and compiled CASToR using the provided Makefile.
After that, I tried to reconstruct example
(castor_benchmark_v3_pet_list-mode)
I got the following error

[354] 09:23 vgate:~/Desktop/castor_benchmark_v3_pet_list-mode >
./run_benchmark_pet_list-mode_unix.sh
==============================================================================================
Reconstruction is going on. Should take from one to several minutes
depending on the hardware.
==============================================================================================
sOutputManager::InitOutputDirectory() -> Output path is
'benchmark_pet_list-mode_challenger'
castor-recon() -> Launch reconstruction from CASToR version 3.0.1.
***** sScannerManager::GetAvailableScanners() -> Could not open the
repository directory at:
/usr/share/cern/root-install/bin:/usr/share/geant4/geant4-install/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/share/gate/Gate-install/bin:/home/gate/castor_v3.0.1/bin:/home/gate/castor_v3.0.1/config/scanner/
***** sScannerManager::FindScannerSystem() -> A problem occurred while
recovering scanner names from the scanner repository !
***** castor-recon() -> A problem occurred while searching for scanner
system !
***** Exit function called. Abort with code 1.
==============================================================================================
Check benchmark results (compare sensitivity image with the reference one)
==============================================================================================
***** Input header file
'benchmark_pet_list-mode_challenger_sensitivity.hdr' is missing or
corrupted !

==============================================================================================
Check benchmark results (compare reconstructed image with the reference one)
==============================================================================================
***** Input header file 'benchmark_pet_list-mode_challenger_it2.hdr' is
missing or corrupted !


How can I clear the error ? Any advice are appreciated.

Best regards,

Suguru Katsube
Kyushu university
-- 
○●----------------------------------------------------------●○
勝部 俊(Suguru Katsube)

九州大学大学院医学系学府保健学専攻

医用量子線科学分野 修士課程1年


Medical Quantum Radiation Science Course,

Department of Health Sciences,

Graduate School of Medical Sciences,

Kyushu University, Fukuoka, Japan

E-mail: sug.katsu at gmail.com <E-mail%3Aymmk88kmmy at gmail.com>
○●----------------------------------------------------------●○
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